Improving resilience to the spread of plant diseases via a regional Pest Common Data Space
PestSpace

PestSpace Nanopore Barcoding Workshop at the University of Warsaw

22 December 2025
On 18–19 December 2025, the University of Warsaw’s Biological and Chemical Research Centre (CNBCh UW) hosted a PestSpace workshop dedicated to the use of nanopore technology for genetic barcoding of plant samples. The event brought together all Polish project partners, including representatives from HR Smolice and the Institute of Plant Genetics, Polish Academy of Sciences.
Technical details

 

The workshop was led by researchers from the University of Warsaw. The laboratory module was conducted by Marta Tischer, Ph.D. and Maksymilian Nowak, who guided participants through the practical steps of preparing and processing samples using nanopore devices.

The bioinformatics module, focused on data processing and analysis, was led by Mikołaj Dziurzyński, Ph.D., also from the University of Warsaw.

During the two-day workshop, participants processed and analysed 48 faba bean samples, collected during the project’s summer fieldwork campaign. The resulting data provide valuable input for ongoing PestSpace research aimed at developing modern tools for monitoring plant diseases and pests.

The workshop atmosphere was highly collaborative and engaging. Participants had many opportunities to exchange insights, discuss methodological challenges, and work together on analytical tasks.

📸The accompanying photos capture some of this positive, hands-on energy that characterised the entire event.

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